Imagine looking at your hand, and knowing nothing of cells, nothing of biochemistry, nothing of DNA. You've learned some anatomy from dissection, so you know your hand contains muscles; but you don't know why muscles move instead of lying there like clay. Your hand is just... stuff... and for some reason it moves under your direction. Is this not magic?
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(Lord Kelvin's explanation) was the theory of vitalism; that the mysterious difference between living matter and non-living matter was explained by an elan vital or vis vitalis. Elan vital infused living matter and caused it to move as consciously directed. Elan vital participated in chemical transformations which no mere non-living particles could undergo—Wöhler's later synthesis of urea, a component of urine, was a major blow to the vitalistic theory because it showed that mere chemistry could duplicate a product of biology.
Calling "elan vital" an explanation, even a fake explanation like phlogiston, is probably giving it too much credit. It functioned primarily as a curiosity-stopper. You said "Why?" and the answer was "Elan vital!"
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But the greater lesson lies in the vitalists' reverence for the elan vital, their eagerness to pronounce it a mystery beyond all science. Meeting the great dragon Unknown, the vitalists did not draw their swords to do battle, but bowed their necks in submission. They took pride in their ignorance, made biology into a sacred mystery, and thereby became loath to relinquish their ignorance when evidence came knocking.
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But ignorance exists in the map, not in the territory. If I am ignorant about a phenomenon, that is a fact about my own state of mind, not a fact about the phenomenon itself. A phenomenon can seem mysterious to some particular person. There are no phenomena which are mysterious of themselves. To worship a phenomenon because it seems so wonderfully mysterious, is to worship your own ignorance.